TAP C3H in Phyllostachys heterocycla

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys

Protein source: BambooGDB


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

zf-CCCH
AP2
zf-C2H2
SRF-TF
two_or_more_Myb_DNA-binding

(Domain names are clickable)



List of proteins (65)

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namename additionClick button to show/hide sequence: Download sequence?
PH01000040G2040PH_genemodel_v1 PH01000040..1327697..1330568 . - . ID=PH01000040G2040;Name=RNA-binding motif protein, putative, expressed
PH01000046G0360PH_genemodel_v1 PH01000046..293318..295299 . + . ID=PH01000046G0360;Name=splicing factor U2AF, putative, expressed
PH01000051G0410PH_genemodel_v1 PH01000051..253349..258300 . + . ID=PH01000051G0410;Name=zinc finger C-x8-C-x5-C-x3-H type family protein
PH01000057G1650PH_genemodel_v1 PH01000057..1146374..1151559 . + . ID=PH01000057G1650;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000070G0060PH_genemodel_v1 PH01000070..47355..49613 . + . ID=PH01000070G0060;Name=splicing factor U2AF, putative, expressed
PH01000087G1380PH_genemodel_v1 PH01000087..1027734..1033345 . + . ID=PH01000087G1380;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000093G1390PH_genemodel_v1 PH01000093..856779..866516 . - . ID=PH01000093G1390;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000128G0650PH_genemodel_v1 PH01000128..548640..552835 . - . ID=PH01000128G0650;Name=aspartic proteinase oryzasin-1 precursor, putative, expressed
PH01000133G1180PH_genemodel_v1 PH01000133..720231..726315 . + . ID=PH01000133G1180;Name=CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
PH01000176G0920PH_genemodel_v1 PH01000176..682498..692551 . + . ID=PH01000176G0920;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000178G1080PH_genemodel_v1 PH01000178..762674..766910 . - . ID=PH01000178G1080;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000254G0620PH_genemodel_v1 PH01000254..450228..452655 . + . ID=PH01000254G0620;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000298G0510PH_genemodel_v1 PH01000298..381816..384593 . - . ID=PH01000298G0510;Name=splicing factor U2AF, putative, expressed
PH01000333G0580PH_genemodel_v1 PH01000333..390210..394040 . - . ID=PH01000333G0580;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000333G0590PH_genemodel_v1 PH01000333..395352..398933 . - . ID=PH01000333G0590;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000363G0960PH_genemodel_v1 PH01000363..658187..660984 . + . ID=PH01000363G0960;Name=zinc finger family protein, putative, expressed
PH01000426G0080PH_genemodel_v1 PH01000426..41780..44820 . + . ID=PH01000426G0080;Name=zinc finger family protein, putative, expressed
PH01000489G0200PH_genemodel_v1 PH01000489..178673..182013 . + . ID=PH01000489G0200;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000491G0570PH_genemodel_v1 PH01000491..413485..415647 . - . ID=PH01000491G0570;Name=zinc finger CCCH type family protein, putative, expressed
PH01000530G0160PH_genemodel_v1 PH01000530..89055..95863 . - . ID=PH01000530G0160;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000561G0310PH_genemodel_v1 PH01000561..194945..202641 . - . ID=PH01000561G0310;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000574G0360PH_genemodel_v1 PH01000574..292054..300016 . + . ID=PH01000574G0360;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000795G0120PH_genemodel_v1 PH01000795..120644..121830 . - . ID=PH01000795G0120;Name=zinc finger family protein, putative, expressed
PH01000804G0310PH_genemodel_v1 PH01000804..203817..207627 . + . ID=PH01000804G0310;Name=RNA-binding motif protein, putative, expressed
PH01000823G0650PH_genemodel_v1 PH01000823..368455..369123 . - . ID=PH01000823G0650;Name=zinc finger family protein, putative, expressed
PH01000824G0690PH_genemodel_v1 PH01000824..485247..491459 . + . ID=PH01000824G0690;Name=Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed
PH01000840G0410PH_genemodel_v1 PH01000840..298166..305092 . + . ID=PH01000840G0410;Name=Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed
PH01000913G0440PH_genemodel_v1 PH01000913..271024..273358 . + . ID=PH01000913G0440;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01000994G0360PH_genemodel_v1 PH01000994..255853..260505 . - . ID=PH01000994G0360;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001028G0210PH_genemodel_v1 PH01001028..147751..153330 . + . ID=PH01001028G0210;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001046G0110PH_genemodel_v1 PH01001046..63821..68700 . - . ID=PH01001046G0110;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001075G0590PH_genemodel_v1 PH01001075..427706..432058 . - . ID=PH01001075G0590;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001113G0050PH_genemodel_v1 PH01001113..25076..27207 . + . ID=PH01001113G0050;Name=zinc finger family protein, putative, expressed
PH01001153G0580PH_genemodel_v1 PH01001153..404140..409097 . + . ID=PH01001153G0580;Name=RNA-binding zinc finger protein, putative, expressed
PH01001245G0240PH_genemodel_v1 PH01001245..167514..172533 . + . ID=PH01001245G0240;Name=zinc finger family protein, putative
PH01001297G0270PH_genemodel_v1 PH01001297..184313..188573 . + . ID=PH01001297G0270;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001317G0380PH_genemodel_v1 PH01001317..258710..266026 . - . ID=PH01001317G0380;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001344G0380PH_genemodel_v1 PH01001344..283144..286435 . + . ID=PH01001344G0380;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001382G0080PH_genemodel_v1 PH01001382..54804..56783 . + . ID=PH01001382G0080;Name=zinc finger C-x8-C-x5-C-x3-H type family protein
PH01001434G0280PH_genemodel_v1 PH01001434..183291..188236 . + . ID=PH01001434G0280;Name=SAP domain containing protein, expressed
PH01001489G0350PH_genemodel_v1 PH01001489..183104..188588 . + . ID=PH01001489G0350;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001573G0270PH_genemodel_v1 PH01001573..143560..145141 . + . ID=PH01001573G0270;Name=splicing factor U2AF, putative, expressed
PH01001575G0100PH_genemodel_v1 PH01001575..53524..56339 . + . ID=PH01001575G0100;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01001633G0030PH_genemodel_v1 PH01001633..15382..16723 . + . ID=PH01001633G0030;Name=zinc finger C-x8-C-x5-C-x3-H type family protein
PH01001699G0100PH_genemodel_v1 PH01001699..60402..62501 . - . ID=PH01001699G0100;Name=splicing factor U2AF, putative, expressed
PH01001800G0280PH_genemodel_v1 PH01001800..168464..169673 . + . ID=PH01001800G0280;Name=zinc finger/CCCH transcription factor, putative, expressed
PH01001962G0090PH_genemodel_v1 PH01001962..34485..42494 . - . ID=PH01001962G0090;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01002036G0230PH_genemodel_v1 PH01002036..169287..177296 . - . ID=PH01002036G0230;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01002164G0020PH_genemodel_v1 PH01002164..10986..14430 . + . ID=PH01002164G0020;Name=splicing factor U2AF, putative, expressed
PH01002169G0300PH_genemodel_v1 PH01002169..137250..140445 . + . ID=PH01002169G0300;Name=nucleic acid binding protein, putative, expressed
PH01002180G0090PH_genemodel_v1 PH01002180..99927..114286 . - . ID=PH01002180G0090;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01002385G0320PH_genemodel_v1 PH01002385..205203..209493 . - . ID=PH01002385G0320;Name=RNA-binding zinc finger protein, putative, expressed
PH01002604G0140PH_genemodel_v1 PH01002604..67728..74133 . + . ID=PH01002604G0140;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01002807G0140PH_genemodel_v1 PH01002807..84105..89334 . - . ID=PH01002807G0140;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01002927G0060PH_genemodel_v1 PH01002927..65341..68299 . - . ID=PH01002927G0060;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01003114G0070PH_genemodel_v1 PH01003114..35622..41995 . + . ID=PH01003114G0070;Name=splicing factor U2AF, putative, expressed
PH01003249G0180PH_genemodel_v1 PH01003249..134944..138856 . + . ID=PH01003249G0180;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01003989G0030PH_genemodel_v1 PH01003989..25321..33466 . - . ID=PH01003989G0030;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01004360G0140PH_genemodel_v1 PH01004360..101613..102269 . - . ID=PH01004360G0140;Name=expressed_protein
PH01005969G0020PH_genemodel_v1 PH01005969..16050..22073 . - . ID=PH01005969G0020;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01005969G0060PH_genemodel_v1 PH01005969..37855..49698 . - . ID=PH01005969G0060;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01007485G0020PH_genemodel_v1 PH01007485..16278..21550 . - . ID=PH01007485G0020;Name=Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed
PH01013915G0010PH_genemodel_v1 PH01013915..73..605 . + . ID=PH01013915G0010;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01149019G0010PH_genemodel_v1 PH01149019..97..848 . + . ID=PH01149019G0010;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
PH01188189G0010PH_genemodel_v1 PH01188189..18..517 . - . ID=PH01188189G0010;Name=zinc finger/CCCH transcription factor, putative, expressed
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum